| 15:30-16:30 | Registration |
| 16:30-16:45 | Opening |
| 16:45-19:05 | Scientific Session 1: Functional Proteomics - Chair: Ruth Birner-Grünberger |
| 16:45-17:45 | Keynote lecture - Daniel K. Nomura: Annotating dysregulated metabolic pathways in cancer using functional proteomic and metabolic platforms |
| 17:45-18:05 | Matthias S. Schittmayer: Functional mapping of CGI-58/ABHD5 |
| 18:05-18:25 | Rolf Breinbauer: Activity-based protein profiling of flavin-dependent oxidases - investigation of potential off-targets of the MAO-inhibitors pargyline and clorgyline |
| 18:25-18:45 | Keiryn L. Bennett: Miniaturised chemical proteomics to profile clinically-relevant kinase inhibitors in tumour needle biopsies |
| 18:45-19:05 | Anita Sahu: qProteomics on PLIN1 mutant lipid droplets using SILAC labelling |
| 19:05-20:30 | Get together (Food and Drinks) |
| 08:30-10:30 | Scientific Session 2: Computational Proteomics - Chair: Gerhard Thallinger |
| 08:30-09:30 | Keynote lecture - Lennart Martens: Taking a bioinformatics hike off the beaten track: metaproteomics and proteomics of non-model organisms |
| 09:30-09:50 | Jacques Colinge: Mapping the strategies of viruses hijacking human host cells innate immune system - a comparative study |
| 09:50-10:10 | Johannes Stadlmann: Still collecting stamps? - A new take on N-glycan structure databases |
| 10:10-10:30 | Oana Tomescu: Comparison of chemostat osmotic conditions based on integrative analysis methods for -omics data |
| 10:30-11:00 | Coffee Break Sponsored by AB Sciex |
| 11:00-11:30 | Christian Baumann - AB Sciex: Creating a digital image of any sample in the MS2 space: the SWATH acquisition workflow on the AB SCIEX TripleTOF(TM) 5600 |
| 11:30-12:30 | Poster Session 1: posters 1-20 (presenters to be at posters) |
| 12:30-13:30 | Lunch |
| 13:30-15:30 | Scientific Session 3: Clinical Proteomics - Chairs: Bernd Gesslbauer, Andreas Kungl |
| 13:30-14:30 | Keynote lecture - Martin Kussmann: Nutrigenomics: proteomics encounters genomics |
| 14:30-14:50 | Andrea Bileck: Characterization of tumor-stroma interactions by means of marker proteins in multiple myeloma |
| 14:50-15:10 | Peter V. Tomazic: Seasonal differences in nasal mucus proteome between allergic rhinitis patients and healthy controls |
| 15:10-15:30 | Rudolf Öhler: Identification of non-HLA antigens targeted by alloreactive antibodies in patients undergoing chronic hemodialysis |
| 15:30-15:50 | Coffee Break Sponsored by Serva |
| 15:50-16:50 | Poster Session 2: posters 21-40 (presenters to be at posters) |
| 16:50-17:20 | Reiner Westermeier - Serva: New Tools for gel-based proteomics |
| 17:20-18:00 | Scientific Session 4: Proteomics of non model organisms - Chair: Ingrid Miller |
| 17:20-17:40 | Monika Ehling-Schulz: Intracellular crosstalk in toxigenic Bacillus cereus |
| 17:40-18:00 | Friedrich Altmann: Glycan profiles of the 27 N-glycosylation sites of an HIV envelope protein |
| 19:00-21:00 | Party (Food, Drinks and Music) |
| 09:00-11:00 | Scientific Session 5: Interactomics and PTMs - Chair: Keiryn Bennett |
| 09:00-10:00 | Keynote lecture - Matthias Gstaiger: Charting the protein interaction landscape of mammalian signaling systems |
| 10:00-10:20 | Taras Stasyk: Interactome analyses of MAP kinase signaling scaffold complexes |
| 10:20-10:40 | Elisabeth Roitinger: Identification of putative ATM/ATR- substrates in Arabidopsis thaliana by quantitative mass spectrometry |
| 10:40-11:00 | Dijana Vitko: Harnessing proteomics to understand the role of HDAC1 and HDAC2 in T-cell development and differentiation |
| 11:00-11:30 | Coffee Break Sponsored by Thermo Scientific |
| 11:30-12:00 | Michaela Scigelova - Thermo Scientific: Marrying qual and qual aspects in -omics world |
| 12:00-12:30 | Matthew Kennedy - Waters: How ion mobility has changed the capabilities of modern mass spectrometry |
| 12:30-13:00 | Lunch |
| 13:00-14:00 | AuPA General Assembly |
| 14:00-15:40 | Scientific Session 6: Technological Advances - Chair: Karl Mechtler |
| 14:00-14:20 | Christoph Jüschke: Global analysis of post-transcriptional gene regulation in Drosophila |
| 14:20-14:40 | Martin Samonig: Top-down proteomics - a fast method to characterize allergenic proteins |
| 14:40-15:40 | Keynote lecture - Wilhelm Haas: Methods, challenges, and goals in isobaric labeling multiplexed quantitative proteomics |
| 15:40-15:50 | Poster and oral presentation awards |
| 15:50-16:00 | AuPA - EuPA: Past, Present, Future |
| 16:00-16:15 | Closing Remarks |
| ZP1 | Alexey Stukalov: Inference of protein complex modular structures from AP-MS data. Visual representation and performance assessment |
| ZP2 | Michaela Helmel: Investigation of the expression profile of proteins from Penicillium chrysogenum during a fermentation process |
| ZP3 | Denise Hissa: Manual de novo sequencing by MALDI TOF/TOF of a novel protein lv-ranaspumin from the frog Leptodactylus vastus |
| ZP4 | Viktoria Dorfer: Identifying HCD & ETD spectra - a new approach |
| ZP5 | Ingrid Miller: On the long way towards finding potential "marker" proteins: the example of porcine saliva |
| ZP6 | Marit Christensen: I want to quantify my biomarkers: Which method should I use? |
| ZP7 | Thomas Koecher: Development of a robust nanoLC-MS/MS system with a vented column set-up and 25 μm ID columns for improved sensitivity: first results |
| ZP8 | Ulrich Roessl: Employing disulphide bond mapping to investigate the aggregation mechanism of recombinant human Granulocyte-Colony Stimulating Factor (rhG-CSF) |
| ZP9 | Rita Bagheri: The individual and combined effect of salt and cadmium stress on cellular antioxidants and proteome of Spinacia oleracea |
| ZP10 | Josè Roberto Aparecido dos Santos Pinto: Sequencing and post-translational modifications of the spidroin 1 from the Nephila clavipes silk spider |
| ZP11 | Tom Grunert: Host pathogen interaction: Proteomic insights into growth regulation of Bacillus cereus |
| ZP12 | Klaus Kratochwill: Proteomic analysis of cell populations in artificial and clinical peritoneal dialysis effluents |
| ZP13 | M. Irfan Qureshi: Employing BN-SDS-PAGE and ESI-MS/MS to study the role of Fe and S in maintenance of thylakoid MPCs under Cd stress |
| ZP14 | Seok Heo: Hippocampal levels and activity of the glutamate transporter 1 and Na+/K+- transporting ATPase alpha-3 are paralleling memory training in the mouse |
| ZP15 | Sacha Stelder: Spore coat proteomics of food-spoilage organisms |
| ZP16 | Katja Parapatics: 'Shotgun' proteomics of low quantities of cellular material in the range obtainable from scarce patient samples |
| ZP17 | Soheil Keihan Falsafi: Scopolamine Administration Modulates Muscarinic, Nicotinic and NMDA Receptor Systems |
| ZP18 | Clemens Gruber: Proteomics study of ER-protein preparations of Pichia pastoris |
| ZP19 | Sophie Fröhlich: Time dependent in vitro adsorption of synovial compounds on ultra-high molecular weight polyethylene investigated by MALDI imaging mass spectrometry |
| ZP20 | Birgit Steinberger: Differential analysis of oviductal epithelial cells at early time points after insemination: a phosphoproteomic approach |
| ZP21 | Christian Viertler: A new technology for simultaneous preservation of biomolecules and morphology in tissues facilitates biomarker development |
| ZP22 | Bianca Bruckner: Identification of phosphoproteins expressed during mycoparasitism: evaluation of sample preparation methods for MALDI-RTOF-MS analysis of phosphopeptides |
| ZP23 | Lisa Weilnböck: Differential proteome analysis of cancer stem cells |
| ZP24 | Maryam Ghafari: Mass spectrometrical identification of hippocampal NMDA receptor subunits NR1, NR2A-D and five novel phosphorylation sites on NR2A and NR2B |
| ZP25 | Pal William Wallace: Investigating the purity of commercially available lipases and esterases using activity based proteomics |
| ZP26 | Przemyslaw Filipek: Characterization of two novel proteins interacting with the p14/Mp1(Lamtor) complex |
| ZP27 | Mohd Nauman: Proteomic analysis of N-efficient and N-inefficient wheat varieties under elevated temperature and CO2 |
| ZP28 | Katarina Fritz: Altered protein expression in adipose triglyceride lipase knockout B-cell tumours |
| ZP29 | Margaux-Denise Lassacher: Proteomic and microbial profiling of human cervico-vaginal fluid and saliva to identify biomarkers for preterm delivery |
| ZP30 | Christian Knoll, Melanie Planyavsky: Proteomic analysis of seminal fluid from infertile patients with idiopathic oligoasthenoteratozoospermia due to oxidative stress and comparison to fertile volunteers |
| ZP31 | Helmut Josef Pelzmann: N-acetyltransferase 8-like impacts on brown adipocyte development and influences UCP1 expression |
| ZP32 | Marie L. Huber, Melanie Planyavsky: A longitudinal evaluation of alternate storage conditions on peptide stability and iTRAQ label reversal by liquid chromatography mass spectrometry |
| ZP33 | Karin Wihsböck: Optimizing high speed acquisition for protein identification in complex matrices |
| ZP34 | Humayra Bashir: Modulation of Arabidopsis thaliana thylakoid and leaf proteome under S-deficiency and Cd stress |
| ZP35 | Florian Breitwieser: Isobar: Making sense out of protein and modified peptide iTRAQ/TMT quantitative data |
| ZP36 | Giorgia Lamberti: The organelle proteome of p14-/- macrophage cells |
| ZP37 | Christopher Gerner: Systematic biomarker discovery by secretome analyses of disease-associated primary human cells |
| ZP38 | Astrid Slany: Examination of cell-type specific protein expression patterns by comparative proteome profiling of primary human cells |
| ZP39 | Elena Rudashevskaya: MSDAM: An improved method for fragmentation and detection of crosslinked peptides on a hybrid LTQ orbitrap velos mass spectrometer |
